Difference between revisions of "Publications"

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# P. Plonski, J.P. Radomski, ''Quick path finding: Quick algorithmic solution for unambiguous labeling of phylogenetic tree nodes'', Comput. Biol. Chem. (2010), in press, [http://dx.doi.org/10.1016/j.compbiolchem.2010.10.002 DOI]
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# A.C. Arcanjo, G. Mazzocco, S.F. de Oliveira, D. Plewczynski, J.P. Radomski, “''''Role of the host genetic variability in the influenza A virus susceptibility''''” Acta Biochimica Polonica 61 (2014) 403-419;
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# J.P. Radomski, P.P. Slonimski, ''Alignment Free Characterization of the Influenza A Hemagglutinin Genes by the ISSCOR Method''', Comptes Rendus Biologies (2010), submitted
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# P. Płoński, J.P. Radomski, “'''''Neighbor Joining Plus - algorithm for phylogenetic tree reconstruction with proper nodes assignment'''''” – submitted;
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# P. Plonski, J.P. Radomski, ''DAC – The Use of Neighbor-Joining for Inferring Very Large Phylogenies – Heuristic Method Improvements'', J. Bioinf. Comput. Biol. (2010), submitted
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# J.P Radomski, P.P Slonimski, W. Zagórski-Ostoja, P. Borowicz “'''''Mapping of the Influenza-A Hemagglutinin Serotypes Evolution by the ISSCOR Method'''''” Acta Biochimica Polonica 61 (2014) 441-451;
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# P. Plonski, J.P. Radomski, Phylogenetic Topology, Structure, and Other Features of the Sequences Set – Their Influence on Trees’ Reconstruction, Comput. Biol. Chem. (2010), submitted
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# J.P. Radomski, P. Płoński, W. Zagórski-Ostoja, “'''''The hemagglutinin mutation E391K of the pandemic 2009 influenza revisited'''''”, Molecular Phylogenetics and Evolution 70 (2014) 29–36 [http://dx.doi.org/10.1016/j.ympev.2013.08.020 DOI]
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# F. Rakowski, M. Gruziel, L. Bieniasz-Krzywiec, J. P. Radomski, ''Influenza epidemic spread simulation for Poland - a large scale, individual based model study'', Physica A: Statistical Mechanics and its Applications, 389 (2010), 3149-3165, [http://dx.doi.org/10.1016/j.physa.2010.04.029 DOI]
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# P. Plonski, J.P. Radomski, '''''''DAC – The Use of Neighbor-Joining for Inferring Very Large Phylogenies – Heuristic Method Improvements'''''" - submitted;
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# F. Rakowski, M. Gruziel, M. Krych, J. P. Radomski, ''Large Scale Daily Contacts and Mobility Model - an Individual-Based Countrywide Simulation Study for Poland'', [http://jasss.soc.surrey.ac.uk/13/1/13.html Journal of Artificial Societies and Social Simulation 13 (1) 13, 2010]
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# P. Plonski, J.P. Radomski, ''''''Phylogenetic Topology, Structure, and Other Features of the Sequences Set – Their Influence on Trees’ Reconstruction'''''' - submitted;
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# T. Żuk, F. Rakowski, J. P. Radomski, ''Probabilistic model of influenza virus transmissibility at various temperature and humidity conditions '', Comput.Biol.Chem., 33 (2009), 339-343, [http://dx.doi.org/doi:10.1016/j.compbiolchem.2009.07.005 DOI]
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# J.P. Radomski, P.P. Slonimski, '''''Alignment Free Characterization of the Influenza A Hemagglutinin Genes by the ISSCOR Method'''''', Comptes Rendus Biologies 335 (2012) 180-193; [http://dx.doi.org/10.1016/j.crvi.2012.01.001 DOI]
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# T. Żuk, F. Rakowski, J. P. Radomski, ''A model of influenza virus spread as a function of temperature and humidity'', Comput.Biol.Chem., 33 (2009), 176-180, [http://dx.doi.org/10.1016/j.compbiolchem.2008.12.001 DOI]
+
# P. Plonski, J.P. Radomski, '''''Quick path finding: Quick algorithmic solution for unambiguous labeling of phylogenetic tree nodes''''', Computational Biology and Chemistry 34 (2010) 300-307. [http://dx.doi.org/10.1016/j.compbiolchem.2010.10.002 DOI]
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# J. P. Radomski and P. P. Slonimski, ''ISSCOR: Intragenic, Stochastic Synonymous Codon Occurrence Replacement – a new method for an alignment-free genome sequence analysis'', Comptes Rendus Biologies, 332 (2009), 336-350 [http://dx.doi.org/10.1016/j.crvi.2008.11.008 DOI]
+
# F. Rakowski, M. Gruziel, L. Bieniasz-Krzywiec, J.P. Radomski, '''''Influenza epidemic spread simulation for Poland - a large scale, individual based model study''''', Physica A: Statistical Mechanics and its Applications, 389 (2010), 3149-3165, [http://dx.doi.org/10.1016/j.physa.2010.04.029 DOI]
 +
# F. Rakowski, M. Gruziel, M. Krych, J.P. Radomski, '''''Large Scale Daily Contacts and Mobility Model - an Individual-Based Countrywide Simulation Study for Poland''''', [http://jasss.soc.surrey.ac.uk/13/1/13.html Journal of Artificial Societies and Social Simulation 13 (1) 13, 2010]
 +
# T. Żuk, F. Rakowski, J.P. Radomski, '''''Probabilistic model of influenza virus transmissibility at various temperature and humidity conditions''''', Comput.Biol.Chem., 33 (2009), 339-343, [http://dx.doi.org/doi:10.1016/j.compbiolchem.2009.07.005 DOI]
 +
# T. Żuk, F. Rakowski, J.P. Radomski, '''''A model of influenza virus spread as a function of temperature and humidity''''', Comput.Biol.Chem., 33 (2009), 176-180, [http://dx.doi.org/10.1016/j.compbiolchem.2008.12.001 DOI]
 +
# J.P. Radomski and P.P. Slonimski, '''''ISSCOR: Intragenic, Stochastic Synonymous Codon Occurrence Replacement – a new method for an alignment-free genome sequence analysis''''', Comptes Rendus Biologies, 332 (2009), 336-350 [http://dx.doi.org/10.1016/j.crvi.2008.11.008 DOI]

Latest revision as of 01:46, 3 February 2015

  1. A.C. Arcanjo, G. Mazzocco, S.F. de Oliveira, D. Plewczynski, J.P. Radomski, “'Role of the host genetic variability in the influenza A virus susceptibility'” Acta Biochimica Polonica 61 (2014) 403-419;
  2. P. Płoński, J.P. Radomski, “Neighbor Joining Plus - algorithm for phylogenetic tree reconstruction with proper nodes assignment” – submitted;
  3. J.P Radomski, P.P Slonimski, W. Zagórski-Ostoja, P. Borowicz “Mapping of the Influenza-A Hemagglutinin Serotypes Evolution by the ISSCOR Method” Acta Biochimica Polonica 61 (2014) 441-451;
  4. J.P. Radomski, P. Płoński, W. Zagórski-Ostoja, “The hemagglutinin mutation E391K of the pandemic 2009 influenza revisited”, Molecular Phylogenetics and Evolution 70 (2014) 29–36 DOI
  5. P. Plonski, J.P. Radomski, ''DAC – The Use of Neighbor-Joining for Inferring Very Large Phylogenies – Heuristic Method Improvements" - submitted;
  6. P. Plonski, J.P. Radomski, 'Phylogenetic Topology, Structure, and Other Features of the Sequences Set – Their Influence on Trees’ Reconstruction' - submitted;
  7. J.P. Radomski, P.P. Slonimski, Alignment Free Characterization of the Influenza A Hemagglutinin Genes by the ISSCOR Method', Comptes Rendus Biologies 335 (2012) 180-193; DOI
  8. P. Plonski, J.P. Radomski, Quick path finding: Quick algorithmic solution for unambiguous labeling of phylogenetic tree nodes, Computational Biology and Chemistry 34 (2010) 300-307. DOI
  9. F. Rakowski, M. Gruziel, L. Bieniasz-Krzywiec, J.P. Radomski, Influenza epidemic spread simulation for Poland - a large scale, individual based model study, Physica A: Statistical Mechanics and its Applications, 389 (2010), 3149-3165, DOI
  10. F. Rakowski, M. Gruziel, M. Krych, J.P. Radomski, Large Scale Daily Contacts and Mobility Model - an Individual-Based Countrywide Simulation Study for Poland, Journal of Artificial Societies and Social Simulation 13 (1) 13, 2010
  11. T. Żuk, F. Rakowski, J.P. Radomski, Probabilistic model of influenza virus transmissibility at various temperature and humidity conditions, Comput.Biol.Chem., 33 (2009), 339-343, DOI
  12. T. Żuk, F. Rakowski, J.P. Radomski, A model of influenza virus spread as a function of temperature and humidity, Comput.Biol.Chem., 33 (2009), 176-180, DOI
  13. J.P. Radomski and P.P. Slonimski, ISSCOR: Intragenic, Stochastic Synonymous Codon Occurrence Replacement – a new method for an alignment-free genome sequence analysis, Comptes Rendus Biologies, 332 (2009), 336-350 DOI
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